Call | Career Development Fellowship (CDF) |
Programme | EDCTP2 |
Start Date | 2021-08-01 |
End Date | 2024-07-31 |
Project Code | TMA2020CDF-3167 |
Status | Active |
Identification and characterization of the Mycobacterium tuberculosis complex lineage-specific epigenomes, transcriptome patterns and regulatory networks and pathways
Institution | Country |
---|---|
University of KwaZulu-Natal (UKZN) | South Africa |
University of KwaZulu-Natal
Lecturer and Researcher
Type | Name | Title | University | Start Date | End Date |
---|---|---|---|---|---|
Masters | Anisha Balgobin | Miss | University of KwaZulu-Natal | 2018 | 2021 |
Masters | Deepika Moti | Miss | University of KwaZulu-Natal | 2018 | 2021 |
PhD | Wadzanai Manjeese | Miss | University of KwaZulu-Natal | 2019 | 2021 |
Masters | Divenita Govender | Miss | University of KwaZulu-Natal | 2019 | 2022 |
Institution | Degree | Year |
---|---|---|
University of KwaZulu-Natal, South Africa | PhD | 2016-04-13 |
University of KwaZulu-Natal, South Africa | BSc Honours (Microbiology) | 2011-04-14 |
University of KwaZulu-Natal, South Africa | Bachelor of Medical Science (Physiology) | 2010-04-15 |
, |
Tuberculosis (TB)
Many studies have identified host-derived lipids, characterised by the abundance of cholesterol, as a major source of carbon nutrition for Mycobacterium tuberculosis during infection. Members of the Mycobacterium tuberculosis complex are biologically different with regards to degree of disease, host range, pathogenicity and transmission. Therefore, the current study aimed at elucidating transcriptome changes during early infection of pulmonary epithelial cells and on an in vitro cholesterol-rich minimal media, in M. tuberculosis clinical strains F15/LAM4/KZN and Beijing, and the laboratory H37Rv strain. Infection of pulmonary epithelial cells elicited the upregulation of fadD28 and hsaC in both the F15/LAM4/KZN and Beijing strains and the downregulation of several other lipid-associated genes. Growth curve analysis revealed F15/LAM4/KZN and Beijing to be slow growers in 7H9 medium and cholesterol-supplemented media. RNA-seq analysis revealed strain-specific transcriptomic changes, thereby affecting different metabolic processes in an in vitro cholesterol model. The differential expression of these genes suggests that the genetically diverse M. tuberculosis clinical strains exhibit strain-specific behaviour that may influence their ability to metabolise lipids, specifically cholesterol, which may account for phenotypic differences observed during infection.